Changes in version 2.0-1.21 (2025-08-19)                

  - No changes but edit RD files with package anchors for lattice and
    latticeExtra. Also change author item in DESCRIPTION.

                Changes in version 2.0-1.20 (2024-02-12)                

  - No changes but new R version of R complains S3 method in RD file. So
    change the dot as underscore for: pca_plot_wrap, mds_plot_wrap,
    lda_plot_wrap, lda_plot_wrap_1 and pls_plot_wrap. (probably .plot is
    the problem)

                Changes in version 2.0-1.19 (2022-02-01)                

  - no changes but test against new version of randomForest 4.7.1 as
    requested.

                Changes in version 2.0-1.18 (2021-11-15)                

  - Replace melt and ddply with base R functions. So no need to load two
    packages reshape and plyr.
  - Move out some un-documented functions.
  - Change CHANGELOG as NEWS.md
  - Move packages from Depends to Imports in DESCRIPTION
  - Spell check on R scripts using RStudio

                      Changes in version 2.0-1.17                       

  - Remove returned values of "direction" in stats.vec and stats.mat. So
    the results are numeric, not character.

                      Changes in version 2.0-1.16                       

  - Add log2 fold-change for stats.mat and stats.vec.
  - Add adjusted p-values for stats.mat only.
  - Provide documents for pca.outlier and pca.outlier.1. The former is
    lattice version and the later is the basic graphics version.

                      Changes in version 2.0-1.15                       

  - .path.package is defunct so use path.package instead in csv2xls.
  - Use pls:::coef.mvr replace coef.mvr since it hides in the new
    version of 'pls'.

                      Changes in version 2.0-1.14                       

  - Re-write two functions for ellipse: panel.elli and panel.elli.1
  - Provide panel.outl for labelling data points outside ellipse. They
    can be considered as outliers.

                      Changes in version 2.0-1.13                       

  - two functions mdsplot and mds_plot_wrap for MDS plotting.

                      Changes in version 2.0-1.12                       

  - fix bug in pval.reject: add na.rm = TRUE
  - change in .grpplot: remove xlab and ylab inside.

                      Changes in version 2.0-1.11                       

  - re-write shrink.list
  - add proprec.auto as hidden function and tidy up

                      Changes in version 2.0-1.10                       

  - stats.vec and stats.mat: summarising two groups stats, such as
    p-values.
  - fs.cl.2, perf and perf.aam: internal functions (21-01-2014).

                       Changes in version 2.0-1.9                       

  - df.summ: add dots argument and modify an user-defined function.

                       Changes in version 2.0-1.8                       

  - classifier: bugs fix

                       Changes in version 2.0-1.7                       

  - plsc: minor changes for returned component pls.out so that R2 can be
    applied.
  - plslda: minor changes for returned component pls.out so that R2 can
    be applied.

                       Changes in version 2.0-1.6                       

  - cl.roc: add output of positive level.
  - cl.perf: add confusion matrix, Kappa and positive outputs.

                       Changes in version 2.0-1.5                       

  - cl.roc: change output and fix bugs.

                       Changes in version 2.0-1.4                       

  - accest: Fix bugs and add more output.

                       Changes in version 2.0-1.3                       

  - cl.auc: adjust auc: if (auc < 0.5) auc <- 1 - auc

                       Changes in version 2.0-1.2                       

  - corrgram.circle and corrgram.ellipse: move 'scales' into argument
    list.

                       Changes in version 2.0-1.1                       

  - pca.outlier: add prefix to ellipse to avoid conflict with package
    car.